Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs10241566 chr7:29690179 T/C 4.19E-13 119 38.33 45.87 6 KM Plot
THYM rs10248839 chr7:29697253 T/C 5.23E-13 118 37.63 46.27 6 KM Plot
THYM rs10249388 chr7:29729135 G/T 3.51E-13 119 38.13 46.27 6 KM Plot
THYM rs10253264 chr7:29692543 T/C 4.29E-13 119 38.13 46.27 6 KM Plot
THYM rs10253849 chr7:29724636 C/T 3.55E-13 119 37.63 48.18 6 KM Plot
THYM rs10258473 chr7:29690439 A/C 4.19E-13 119 38.33 45.87 6 KM Plot
THYM rs10260080 chr7:29757941 T/G 1.59E-12 114 38.13 50.82 6 KM Plot
THYM rs10262227 chr7:29704073 G/A 5.23E-13 118 37.63 46.27 6 KM Plot
THYM rs10272065 chr7:29694236 A/T 4.29E-13 119 38.13 46.27 6 KM Plot
THYM rs10276157 chr7:29665016 A/G 5.46E-13 118 38.23 46.27 6 KM Plot
THYM rs1027871 chr8:50069828 T/C 3.34E-10 117 46.6 50.1 25.83 KM Plot
THYM rs10283669 chr9:97170504 C/A 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs1031304 chr8:6390162 T/C 2.13E-8 116 42.73 31.72 12.63 KM Plot
THYM rs10405633 chr19:41291703 G/A 4.4E-13 117 45.87 35.13 6 KM Plot
THYM rs1043169 chr9:133997543 C/G 0.000113 116 39.75 42.33 12.75 KM Plot